7 Best WMS Software for Ecommerce in 2025

For ecommerce businesses seeking top WMS software in 2025, consider ShipHero for tailored growth, Softeon for high-volume automation, and Logiwa for cloud-based multi-warehouse control. Zoho Inventory streamlines SMB operations, while Cin7 excels in multi-channel inventory management. NetSuite WMS offers enterprise-grade integration, and Fishbowl provides flexible solutions for expanding brands. Each system enhances real-time tracking, automation, and scalability to optimize fulfillment. Explore further to uncover detailed insights on transforming warehouse efficiency.

Key Takeaways

• ShipHero excels in ecommerce with real-time inventory tracking and automated order routing.
• Cin7 integrates with over 700 platforms, enhancing ecommerce inventory automation.
• Logiwa offers intelligent order routing and connects with 200+ ecommerce platforms.
• NetSuite WMS provides seamless ERP integration and real-time inventory dashboards.
• Zoho Inventory supports ecommerce with multi-channel tracking and scalable plans.

ShipHero: Tailored for Ecommerce Growth

ShipHero emerges as a robust cloud-based warehouse management system (WMS) specifically designed for ecommerce businesses and third-party logistics providers (3PLs). It excels in streamlining operations with real-time inventory tracking across multiple warehouses and sales channels, automating order routing, and generating shipping labels. Tailored for scalability, ShipHero supports businesses from startups to large enterprises, ensuring seamless growth with integrations to platforms like Shopify and Amazon. Its comprehensive analytics and customizable reporting tools further empower businesses to make data-driven decisions for optimizing operations with robust analytics.

A standout aspect is its user-centric approach, evident in the Onboarding Process, where knowledgeable specialists guide new users through setup and customization, as per customer feedback. Additionally, ShipHero’s Support Services are often praised for responsiveness, aiding users in navigating the system’s robust features like batch picking and returns management. While some reviews note initial contact challenges, the platform’s mobile app, optimized picking routes, and Open API for custom integrations solidify its position as a top-tier solution for ecommerce fulfillment efficiency.

Softeon: Automation for High-Volume Operations

Moving from tailored ecommerce solutions, attention shifts to Softeon, a Tier-1 warehouse management system (WMS) provider focused on optimizing performance for high-volume operations. Designed for ecommerce businesses with large warehouses and complex needs, Softeon excels in delivering Volume Efficiency through advanced AI Automation. Its integrated Warehouse Execution System (WES) orchestrates operations, managing automation technologies like robots, conveyors, and Goods-to-Person systems, while providing real-time visibility into throughput and bottlenecks.

Softeon’s direct integration with material handling equipment and robotics, supported by robust APIs, ensures seamless multi-agent orchestration across diverse systems. AI-powered tools enhance picking and order fulfillment, boosting productivity and reducing manual decisions. Its scalable, configurable platform adapts to rapid growth and seasonal peaks, supporting everything from basic to intricate automation levels. For high-volume environments, Softeon streamlines processes, maximizes throughput, and drives operational excellence with cutting-edge technology and flexible architecture.

Logiwa: Cloud-Based Multi-Warehouse Mastery

Logiwa stands out in the WMS landscape with its robust cloud-based system, enabling seamless multi-warehouse coordination for ecommerce businesses managing complex logistics. Its ability to integrate effortlessly with over 200 ecommerce platforms, marketplaces, and carriers ensures unified operations across diverse sales channels. This connectivity, paired with smart order routing and inventory segmentation, optimizes fulfillment efficiency and scalability for growing enterprises.

Seamless Multi-Warehouse Coordination

Mastery of multi-warehouse operations is a critical advantage for e-commerce businesses aiming to scale efficiently, and Logiwa stands out with its cloud-based system designed for seamless coordination. Offering Remote Oversight, Logiwa enables centralized control and real-time visibility into inventory across multiple locations, ensuring precise tracking of orders from any device.

With Automated Synchronization, inventory updates dynamically across warehouses and sales channels, preventing stockouts or overstocking. Logiwa’s intelligent order routing optimizes fulfillment by considering factors like proximity and availability. Key strengths include:

• Real-time inventory visibility network-wide.
• Automated routing to reduce shipping costs.
• Scalable architecture for growing operations.
• Streamlined fulfillment via automation rules.

This robust system empowers e-commerce businesses to manage complex supply chains with efficiency and accuracy.

Effortless Platform Integration

For e-commerce businesses seeking streamlined operations, the ability to integrate seamlessly with various platforms is paramount, and Logiwa’s cloud-based WMS excels in this domain. Leveraging an Open REST API, Logiwa connects effortlessly with e-commerce platforms like Shopify and Amazon, ERPs such as NetSuite, and carriers including UPS and FedEx. Its intuitive Interface Design simplifies data syncing for inventory, orders, and shipping updates across channels.

Beyond pre-built connectors, Logiwa’s Integration Orchestrator and webhooks enable custom solutions, ensuring scalability. Robust Error Handling mechanisms minimize disruptions during data exchanges, maintaining operational continuity. With real-time visibility and automated workflows, Logiwa centralizes data as a single source of truth, enhancing order accuracy and fulfillment speed for multi-warehouse e-commerce environments.

Zoho Inventory: Streamlined for Small to Medium Businesses

Zoho Inventory stands out as a cloud-based warehouse management solution tailored for small to medium businesses, offering key features like real-time inventory tracking, multi-channel selling, and automated order fulfillment. Its seamless integration with the Zoho ecosystem, including Zoho Books and Zoho CRM, provides a unified platform for managing ecommerce operations alongside accounting and customer relations. Additionally, with scalable pricing plans based on order volume and warehouse needs, it supports growing SMBs by adapting to their expanding requirements.

Zoho Inventory Key Features

Navigating the complexities of e-commerce inventory management becomes significantly easier with Zoho Inventory, a solution tailored for small to medium businesses. This platform offers robust tools to streamline operations with precision, focusing on real-time tracking and efficient order fulfillment. Its analytical capabilities ensure businesses maintain control over stock levels and sales trends through detailed reporting.

Key features include:

• Batch Tracking: Ensures traceability and manages expiry dates for perishable goods.
• Low Alerts: Notifies users of dwindling stock to prevent shortages.
• Multi-Warehouse Management: Tracks inventory across various locations seamlessly.
• Shipping Integration: Connects with carriers like USPS and FedEx for real-time rates and labels.

Zoho Inventory empowers e-commerce entities with tech-savvy solutions to optimize inventory and enhance operational efficiency.

Integration With Zoho Ecosystem

Small to medium e-commerce businesses leveraging Zoho Inventory gain a significant edge through its deep integration within the broader Zoho ecosystem. This App Synergy connects Zoho Inventory with tools like Zoho Books, CRM, and Commerce, creating a unified operational framework. Seamless Data Flow across these platforms minimizes manual input, reducing errors and enhancing efficiency.

With Zoho Books, inventory data syncs to financial records for accurate reporting. Zoho CRM integration aligns customer and sales order details, empowering sales teams. Zoho Commerce ensures real-time stock updates on online storefronts, preventing overselling. Beyond native apps, Zoho Inventory supports third-party platforms and APIs, enabling custom connections. This interconnected ecosystem streamlines processes, offering a robust solution for e-commerce operations.

Scalability for Growing SMBs

As e-commerce businesses evolve, the ability to scale operations efficiently becomes a critical factor in maintaining competitiveness. Zoho Inventory offers a robust solution for growing SMBs with its tiered pricing and feature scalability. Designed for small to medium businesses, it supports order volumes up to 30,000 monthly and unlimited warehouses at higher tiers, alongside automation and multi-location tracking.

Key scalability strengths include:

• Transparent pricing for Financial Forecasting and budgeting.
• Multi-channel order centralization for streamlined growth.
• Advanced reporting to aid Leadership Development in strategic planning.
• Flexible plan upgrades to match expanding needs.

While ideal for SMBs, it may face limitations for larger enterprises, requiring careful monitoring of usage limits to anticipate necessary upgrades during rapid scaling.

Cin7: Multi-Channel Inventory Powerhouse

Cin7 emerges as a robust cloud-based inventory management solution, seamlessly blending warehouse management, POS, and B2B e-commerce capabilities into a unified platform. Tailored for small to medium-sized businesses, it excels in automating inventory, sales, and accounting across retail, wholesale, and e-commerce sectors. With integrations to major platforms like Shopify and Amazon, Cin7 synchronizes stock levels and orders in real-time, preventing overselling via a single dashboard for multi-channel fulfillment.

Its advanced WMS module optimizes picking, packing, and shipping, supported by barcode scanning for precision. Cin7’s AI Forecasting, powered by ForesightAI, predicts stock needs to avoid shortages, while the B2B Portal enables wholesale clients to manage orders with customized pricing. Offering over 700 integrations, including QuickBooks and EDI, it automates workflows, reducing errors. With mobile access and customizable reporting, Cin7 delivers actionable insights, making it a powerhouse for e-commerce operations seeking efficiency and scalability.

NetSuite WMS: Enterprise-Level Integration

NetSuite WMS stands out as a premier solution within the NetSuite cloud ERP ecosystem, delivering seamless enterprise-level integration for e-commerce businesses. As a core component of a Unified Platform, it natively connects with financial, CRM, and supply chain modules, ensuring a single source of truth for inventory and orders. This integration eliminates disparate systems, providing Real time Data flow across operations, which is critical for dynamic e-commerce environments.

NetSuite WMS excels in the cloud ERP ecosystem, offering seamless integration for e-commerce with unified data flow across dynamic operations.

Its robust functionality enhances efficiency through features like:

• Real-time inventory tracking across multiple locations for accurate stock visibility.
• Mobile apps with barcode scanning to minimize errors in fulfillment.
• Automated warehouse processes like picking and packing for faster order turnaround.
• Customizable workflows to adapt to specific business needs.

With cloud-based scalability and Real time Data dashboards, NetSuite WMS empowers businesses to monitor KPIs and optimize warehouse performance, making it a strategic choice for enterprise-level e-commerce operations.

Fishbowl: Flexible Warehousing for Growing Brands

For e-commerce businesses seeking a more tailored solution after exploring enterprise-grade options like NetSuite WMS, Fishbowl emerges as a compelling choice with its flexible warehousing capabilities designed for small- to mid-sized brands. This inventory management software excels in providing real-time Inventory Visibility, enabling businesses to track stock across multiple locations with precision through features like serial/batch tracking and automated reorder points. Its warehouse management tools, including barcode scanning via the Fishbowl GO app, streamline operations with Mobile Scanning for receiving, putaway, and cycle counts.

Fishbowl also integrates seamlessly with QuickBooks, Xero, and e-commerce platforms, enhancing operational efficiency. Offering both on-premises and cloud-based deployments, it caters to diverse needs while supporting scalability for growing brands. With robust reporting and manufacturing modules, Fishbowl delivers actionable insights. Though pricing starts at $349 monthly for subscriptions, it remains a cost-effective alternative to full-scale ERPs for SMBs requiring advanced control.